Fine-Scale Structure Analysis Shows Epidemic Patterns of Clonal Complex 95, a Cosmopolitan Escherichia coli Lineage Responsible for Extraintestinal Infection
Identifieur interne : 000C16 ( Main/Exploration ); précédent : 000C15; suivant : 000C17Fine-Scale Structure Analysis Shows Epidemic Patterns of Clonal Complex 95, a Cosmopolitan Escherichia coli Lineage Responsible for Extraintestinal Infection
Auteurs : David M. Gordon [Australie] ; Sarah Geyik [Australie] ; Olivier Clermont [France] ; Claire L. O Rien [Australie] ; Shiwei Huang [Australie] ; Charmalie Abayasekara [Australie, Sri Lanka] ; Ashwin Rajesh [Australie] ; Karina Kennedy [Australie] ; Peter Collignon [Australie] ; Paul Pavli [Australie] ; Christophe Rodriguez [France] ; Brian D. Johnston [États-Unis] ; James R. Johnson [États-Unis] ; Jean-Winoc Decousser [France] ; Erick Denamur [France]Source :
- mSphere [ 2379-5042 ] ; 2017.
Abstract
Url:
DOI: 10.1128/mSphere.00168-17
PubMed: 28593194
PubMed Central: 5451516
Affiliations:
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Gordon</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Geyik, Sarah" sort="Geyik, Sarah" uniqKey="Geyik S" first="Sarah" last="Geyik">Sarah Geyik</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Clermont, Olivier" sort="Clermont, Olivier" uniqKey="Clermont O" first="Olivier" last="Clermont">Olivier Clermont</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>UMR 1137 INSERM and Université Paris Diderot, IAME, Sorbonne Paris Cité, Paris, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR 1137 INSERM and Université Paris Diderot, IAME, Sorbonne Paris Cité, Paris</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation></author><author><name sortKey="O Rien, Claire L" sort="O Rien, Claire L" uniqKey="O Rien C" first="Claire L." last="O Rien">Claire L. 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Huang</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Medical School, Australian National University, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Medical School, Australian National University, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Abayasekara, Charmalie" sort="Abayasekara, Charmalie" uniqKey="Abayasekara C" first="Charmalie" last="Abayasekara">Charmalie Abayasekara</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital 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Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Kennedy, Karina" sort="Kennedy, Karina" uniqKey="Kennedy K" first="Karina" last="Kennedy">Karina Kennedy</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Medical School, Australian National University, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Medical School, Australian National University, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff6"><addr-line>Infectious Disease and Microbiology, Canberra Hospital, Woden, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Infectious Disease and Microbiology, Canberra Hospital, Woden, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Collignon, Peter" sort="Collignon, Peter" uniqKey="Collignon P" first="Peter" last="Collignon">Peter Collignon</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Medical School, Australian National University, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Medical School, Australian National University, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff6"><addr-line>Infectious Disease and Microbiology, Canberra Hospital, Woden, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Infectious Disease and Microbiology, Canberra Hospital, Woden, Australian 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Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>Gastroenterology and Hepatology Unit, Canberra Hospital, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Gastroenterology and Hepatology Unit, Canberra Hospital, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Rodriguez, Christophe" sort="Rodriguez, Christophe" uniqKey="Rodriguez C" first="Christophe" last="Rodriguez">Christophe Rodriguez</name><affiliation wicri:level="3"><nlm:aff id="aff8"><addr-line>UMR 955 INSERM and Université Paris-Est, Assistance Publique-Hôpitaux de Paris, Hôpital Henri Mondor, Créteil, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR 955 INSERM and Université Paris-Est, Assistance Publique-Hôpitaux de Paris, Hôpital Henri 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Gordon</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Geyik, Sarah" sort="Geyik, Sarah" uniqKey="Geyik S" first="Sarah" last="Geyik">Sarah Geyik</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Clermont, Olivier" sort="Clermont, Olivier" uniqKey="Clermont O" first="Olivier" last="Clermont">Olivier Clermont</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>UMR 1137 INSERM and Université Paris Diderot, IAME, Sorbonne Paris Cité, Paris, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR 1137 INSERM and Université Paris Diderot, IAME, Sorbonne Paris Cité, Paris</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation></author><author><name sortKey="O Rien, Claire L" sort="O Rien, Claire L" uniqKey="O Rien C" first="Claire L." last="O Rien">Claire L. O Rien</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Medical School, Australian National University, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Medical School, Australian National University, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>Gastroenterology and Hepatology Unit, Canberra Hospital, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Gastroenterology and Hepatology Unit, Canberra Hospital, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Huang, Shiwei" sort="Huang, Shiwei" uniqKey="Huang S" first="Shiwei" last="Huang">Shiwei Huang</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Medical School, Australian National University, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Medical School, Australian National University, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Abayasekara, Charmalie" sort="Abayasekara, Charmalie" uniqKey="Abayasekara C" first="Charmalie" last="Abayasekara">Charmalie Abayasekara</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff5"><addr-line>Department of Botany, Faculty of Science, University of Peradeniya, Peradeniya, Sri Lanka</addr-line></nlm:aff><country xml:lang="fr">Sri Lanka</country><wicri:regionArea>Department of Botany, Faculty of Science, University of Peradeniya, Peradeniya</wicri:regionArea><wicri:noRegion>Peradeniya</wicri:noRegion></affiliation></author><author><name sortKey="Rajesh, Ashwin" sort="Rajesh, Ashwin" uniqKey="Rajesh A" first="Ashwin" last="Rajesh">Ashwin Rajesh</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Ecology and Evolution, Research School of Biology, the Australian National University, Acton, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Kennedy, Karina" sort="Kennedy, Karina" uniqKey="Kennedy K" first="Karina" last="Kennedy">Karina Kennedy</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Medical School, Australian National University, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Medical School, Australian National University, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff6"><addr-line>Infectious Disease and Microbiology, Canberra Hospital, Woden, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Infectious Disease and Microbiology, Canberra Hospital, Woden, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Collignon, Peter" sort="Collignon, Peter" uniqKey="Collignon P" first="Peter" last="Collignon">Peter Collignon</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Medical School, Australian National University, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Medical School, Australian National University, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff6"><addr-line>Infectious Disease and Microbiology, Canberra Hospital, Woden, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Infectious Disease and Microbiology, Canberra Hospital, Woden, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff7"><addr-line>ACT Pathology, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>ACT Pathology, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Pavli, Paul" sort="Pavli, Paul" uniqKey="Pavli P" first="Paul" last="Pavli">Paul Pavli</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Medical School, Australian National University, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Medical School, Australian National University, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>Gastroenterology and Hepatology Unit, Canberra Hospital, Canberra, Australian Capital Territory, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Gastroenterology and Hepatology Unit, Canberra Hospital, Canberra, Australian Capital Territory</wicri:regionArea><wicri:noRegion>Australian Capital Territory</wicri:noRegion></affiliation></author><author><name sortKey="Rodriguez, Christophe" sort="Rodriguez, Christophe" uniqKey="Rodriguez C" first="Christophe" last="Rodriguez">Christophe Rodriguez</name><affiliation wicri:level="3"><nlm:aff id="aff8"><addr-line>UMR 955 INSERM and Université Paris-Est, Assistance Publique-Hôpitaux de Paris, Hôpital Henri Mondor, Créteil, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR 955 INSERM and Université Paris-Est, Assistance Publique-Hôpitaux de Paris, Hôpital Henri Mondor, Créteil</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Créteil</settlement></placeName></affiliation></author><author><name sortKey="Johnston, Brian D" sort="Johnston, Brian D" uniqKey="Johnston B" first="Brian D." last="Johnston">Brian D. Johnston</name><affiliation wicri:level="2"><nlm:aff id="aff9"><addr-line>VA Medical Center and Department of Medicine, University of Minnesota, Infectious Diseases, Minneapolis, Minnesota, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>VA Medical Center and Department of Medicine, University of Minnesota, Infectious Diseases, Minneapolis, Minnesota</wicri:regionArea><placeName><region type="state">Minnesota</region></placeName></affiliation></author><author><name sortKey="Johnson, James R" sort="Johnson, James R" uniqKey="Johnson J" first="James R." last="Johnson">James R. Johnson</name><affiliation wicri:level="2"><nlm:aff id="aff9"><addr-line>VA Medical Center and Department of Medicine, University of Minnesota, Infectious Diseases, Minneapolis, Minnesota, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>VA Medical Center and Department of Medicine, University of Minnesota, Infectious Diseases, Minneapolis, Minnesota</wicri:regionArea><placeName><region type="state">Minnesota</region></placeName></affiliation></author><author><name sortKey="Decousser, Jean Winoc" sort="Decousser, Jean Winoc" uniqKey="Decousser J" first="Jean-Winoc" last="Decousser">Jean-Winoc Decousser</name><affiliation wicri:level="3"><nlm:aff id="aff10"><addr-line>UMR 1137, INSERM, IAME, Paris and Assistance Publique-Hôpitaux de Paris, Hôpital Henri Mondor, Créteil, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR 1137, INSERM, IAME, Paris and Assistance Publique-Hôpitaux de Paris, Hôpital Henri Mondor, Créteil</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Créteil</settlement></placeName></affiliation></author><author><name sortKey="Denamur, Erick" sort="Denamur, Erick" uniqKey="Denamur E" first="Erick" last="Denamur">Erick Denamur</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>UMR 1137 INSERM and Université Paris Diderot, IAME, Sorbonne Paris Cité, Paris, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR 1137 INSERM and Université Paris Diderot, IAME, Sorbonne Paris Cité, Paris</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="aff11"><addr-line>Assistance Publique: Hôpitaux de Paris, Hôpital Bichat, Paris, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Assistance Publique: Hôpitaux de Paris, Hôpital Bichat, Paris</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation></author></analytic><series><title level="j">mSphere</title><idno type="eISSN">2379-5042</idno><imprint><date when="2017">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><italic>Escherichia coli</italic> clonal complex 95 represents a cosmopolitan, genetically diverse lineage, and the extensive substructure observed in this lineage is epidemiologically and clinically relevant. The frequency with which CC95 strains are responsible for extraintestinal infection appears to have been stable over the past 15 years. However, the different subgroups identified within this lineage have an epidemic structure depending on the host, sample, continent, and time. Thus, the evolution and spread of strains belonging to CC95 are very different from those of another cosmopolitan human-associated clonal complex, CC131, which has increased significantly in frequency as a cause of extraintestinal infection over the past 15 years due to the evolution and spread of two very closely related, nearly monomorphic lineages.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Achtman, M" uniqKey="Achtman M">M Achtman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bart, Mj" uniqKey="Bart M">MJ Bart</name></author><author><name sortKey="Van Gent, M" uniqKey="Van Gent M">M van Gent</name></author><author><name sortKey="Van Der Heide, Hg" uniqKey="Van Der Heide H">HG van der Heide</name></author><author><name sortKey="Boekhorst, J" uniqKey="Boekhorst J">J Boekhorst</name></author><author><name sortKey="Hermans, P" uniqKey="Hermans P">P Hermans</name></author><author><name sortKey="Parkhill, J" uniqKey="Parkhill J">J Parkhill</name></author><author><name sortKey="Mooi, Fr" uniqKey="Mooi F">FR Mooi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cui, Y" uniqKey="Cui Y">Y Cui</name></author><author><name sortKey="Yu, C" uniqKey="Yu C">C Yu</name></author><author><name sortKey="Yan, Y" uniqKey="Yan Y">Y Yan</name></author><author><name sortKey="Li, D" uniqKey="Li D">D Li</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y Li</name></author><author><name sortKey="Jombart, T" uniqKey="Jombart T">T Jombart</name></author><author><name sortKey="Weinert, La" uniqKey="Weinert L">LA Weinert</name></author><author><name sortKey="Wang, Z" uniqKey="Wang Z">Z Wang</name></author><author><name sortKey="Guo, Z" uniqKey="Guo Z">Z Guo</name></author><author><name sortKey="Xu, L" uniqKey="Xu L">L Xu</name></author><author><name sortKey="Zhang, Y" uniqKey="Zhang Y">Y Zhang</name></author><author><name sortKey="Zheng, H" uniqKey="Zheng H">H Zheng</name></author><author><name sortKey="Qin, N" uniqKey="Qin N">N Qin</name></author><author><name sortKey="Xiao, X" uniqKey="Xiao X">X Xiao</name></author><author><name sortKey="Wu, M" uniqKey="Wu M">M Wu</name></author><author><name sortKey="Wang, X" uniqKey="Wang X">X Wang</name></author><author><name sortKey="Zhou, D" uniqKey="Zhou D">D Zhou</name></author><author><name sortKey="Qi, Z" uniqKey="Qi Z">Z Qi</name></author><author><name sortKey="Du, Z" uniqKey="Du Z">Z Du</name></author><author><name sortKey="Wu, H" uniqKey="Wu H">H Wu</name></author><author><name sortKey="Yang, X" uniqKey="Yang X">X Yang</name></author><author><name sortKey="Cao, H" uniqKey="Cao H">H Cao</name></author><author><name sortKey="Wang, H" uniqKey="Wang H">H Wang</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Yao, S" uniqKey="Yao S">S Yao</name></author><author><name sortKey="Rakin, A" uniqKey="Rakin A">A Rakin</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y Li</name></author><author><name sortKey="Falush, D" uniqKey="Falush D">D Falush</name></author><author><name sortKey="Balloux, F" uniqKey="Balloux F">F Balloux</name></author><author><name sortKey="Achtman, M" uniqKey="Achtman M">M Achtman</name></author><author><name sortKey="Song, Y" uniqKey="Song Y">Y Song</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Yang, R" uniqKey="Yang R">R Yang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Holt, Ke" uniqKey="Holt K">KE Holt</name></author><author><name sortKey="Parkhill, J" uniqKey="Parkhill J">J Parkhill</name></author><author><name sortKey="Mazzoni, Cj" uniqKey="Mazzoni C">CJ Mazzoni</name></author><author><name sortKey="Roumagnac, P" uniqKey="Roumagnac P">P Roumagnac</name></author><author><name sortKey="Weill, Fx" uniqKey="Weill F">FX Weill</name></author><author><name sortKey="Goodhead, I" uniqKey="Goodhead I">I Goodhead</name></author><author><name sortKey="Rance, R" uniqKey="Rance R">R Rance</name></author><author><name sortKey="Baker, S" uniqKey="Baker S">S Baker</name></author><author><name sortKey="Maskell, Dj" uniqKey="Maskell D">DJ Maskell</name></author><author><name sortKey="Wain, J" uniqKey="Wain J">J Wain</name></author><author><name sortKey="Dolecek, C" uniqKey="Dolecek C">C Dolecek</name></author><author><name sortKey="Achtman, M" uniqKey="Achtman M">M Achtman</name></author><author><name sortKey="Dougan, G" uniqKey="Dougan G">G Dougan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schuenemann, Vj" uniqKey="Schuenemann V">VJ Schuenemann</name></author><author><name sortKey="Singh, P" uniqKey="Singh P">P Singh</name></author><author><name sortKey="Mendum, Ta" uniqKey="Mendum T">TA Mendum</name></author><author><name sortKey="Krause Kyora, B" uniqKey="Krause Kyora B">B Krause-Kyora</name></author><author><name sortKey="J Ger, G" uniqKey="J Ger G">G Jäger</name></author><author><name sortKey="Bos, Ki" uniqKey="Bos K">KI Bos</name></author><author><name sortKey="Herbig, A" uniqKey="Herbig A">A Herbig</name></author><author><name sortKey="Economou, C" uniqKey="Economou C">C Economou</name></author><author><name sortKey="Benjak, A" uniqKey="Benjak A">A Benjak</name></author><author><name sortKey="Busso, P" uniqKey="Busso P">P Busso</name></author><author><name sortKey="Nebel, A" uniqKey="Nebel A">A Nebel</name></author><author><name sortKey="Boldsen, Jl" uniqKey="Boldsen J">JL Boldsen</name></author><author><name sortKey="Kjellstrom, A" uniqKey="Kjellstrom A">A Kjellström</name></author><author><name sortKey="Wu, H" uniqKey="Wu H">H Wu</name></author><author><name sortKey="Stewart, Gr" uniqKey="Stewart G">GR Stewart</name></author><author><name sortKey="Taylor, Gm" uniqKey="Taylor G">GM Taylor</name></author><author><name sortKey="Bauer, P" uniqKey="Bauer P">P Bauer</name></author><author><name sortKey="Lee, Oy" uniqKey="Lee O">OY Lee</name></author><author><name sortKey="Wu, Hh" uniqKey="Wu H">HH Wu</name></author><author><name sortKey="Minnikin, De" uniqKey="Minnikin D">DE Minnikin</name></author><author><name sortKey="Besra, Gs" uniqKey="Besra G">GS Besra</name></author><author><name sortKey="Tucker, K" uniqKey="Tucker K">K Tucker</name></author><author><name sortKey="Roffey, S" uniqKey="Roffey S">S Roffey</name></author><author><name sortKey="Sow, So" uniqKey="Sow S">SO Sow</name></author><author><name sortKey="Cole, St" uniqKey="Cole S">ST Cole</name></author><author><name sortKey="Nieselt, K" uniqKey="Nieselt K">K Nieselt</name></author><author><name sortKey="Krause, J" uniqKey="Krause J">J Krause</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhou, Z" uniqKey="Zhou Z">Z Zhou</name></author><author><name sortKey="Mccann, A" uniqKey="Mccann A">A McCann</name></author><author><name sortKey="Weill, Fx" uniqKey="Weill F">FX Weill</name></author><author><name sortKey="Blin, C" uniqKey="Blin C">C Blin</name></author><author><name sortKey="Nair, S" uniqKey="Nair S">S Nair</name></author><author><name sortKey="Wain, J" uniqKey="Wain J">J Wain</name></author><author><name sortKey="Dougan, G" uniqKey="Dougan G">G Dougan</name></author><author><name sortKey="Achtman, M" uniqKey="Achtman M">M Achtman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Clermont, O" uniqKey="Clermont O">O Clermont</name></author><author><name sortKey="Christenson, Jk" uniqKey="Christenson J">JK Christenson</name></author><author><name sortKey="Daubie, As" uniqKey="Daubie A">AS Daubié</name></author><author><name sortKey="Gordon, Dm" uniqKey="Gordon D">DM Gordon</name></author><author><name sortKey="Denamur, E" uniqKey="Denamur E">E Denamur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Riley, Lw" uniqKey="Riley L">LW Riley</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ben Zakour, Nl" uniqKey="Ben Zakour N">NL Ben Zakour</name></author><author><name sortKey="Alsheikh Hussain, As" uniqKey="Alsheikh Hussain A">AS Alsheikh-Hussain</name></author><author><name sortKey="Ashcroft, Mm" uniqKey="Ashcroft M">MM Ashcroft</name></author><author><name sortKey="Khanh Nhu, T" uniqKey="Khanh Nhu T">T Khanh Nhu</name></author><author><name sortKey="Roberts, Lw" uniqKey="Roberts L">LW Roberts</name></author><author><name sortKey="Stanton Cook, M" uniqKey="Stanton Cook M">M Stanton-Cook</name></author><author><name sortKey="Schembri, Ma" uniqKey="Schembri M">MA Schembri</name></author><author><name sortKey="Beatson, Sa" uniqKey="Beatson S">SA Beatson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stoesser, N" uniqKey="Stoesser N">N Stoesser</name></author><author><name sortKey="Sheppard, Ae" uniqKey="Sheppard A">AE Sheppard</name></author><author><name sortKey="Pankhurst, L" uniqKey="Pankhurst L">L Pankhurst</name></author><author><name sortKey="De Maio, N" uniqKey="De Maio N">N De Maio</name></author><author><name sortKey="Moore, Ce" uniqKey="Moore C">CE Moore</name></author><author><name sortKey="Sebra, R" uniqKey="Sebra R">R Sebra</name></author><author><name sortKey="Turner, P" uniqKey="Turner P">P Turner</name></author><author><name sortKey="Anson, Lw" uniqKey="Anson L">LW Anson</name></author><author><name sortKey="Kasarskis, A" uniqKey="Kasarskis A">A Kasarskis</name></author><author><name sortKey="Batty, Em" uniqKey="Batty E">EM Batty</name></author><author><name sortKey="Kos, V" uniqKey="Kos V">V Kos</name></author><author><name sortKey="Wilson, Dj" uniqKey="Wilson D">DJ Wilson</name></author><author><name sortKey="Phetsouvanh, R" uniqKey="Phetsouvanh R">R Phetsouvanh</name></author><author><name sortKey="Wyllie, D" uniqKey="Wyllie D">D Wyllie</name></author><author><name sortKey="Sokurenko, E" uniqKey="Sokurenko E">E Sokurenko</name></author><author><name sortKey="Manges, Ar" uniqKey="Manges A">AR Manges</name></author><author><name sortKey="Johnson, Tj" uniqKey="Johnson T">TJ Johnson</name></author><author><name sortKey="Price, Lb" uniqKey="Price L">LB Price</name></author><author><name sortKey="Peto, Te" uniqKey="Peto T">TE Peto</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author><author><name sortKey="Didelot, X" uniqKey="Didelot X">X Didelot</name></author><author><name sortKey="Walker, As" uniqKey="Walker A">AS Walker</name></author><author><name sortKey="Crook, Dw" uniqKey="Crook D">DW Crook</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dias, Rc" uniqKey="Dias R">RC Dias</name></author><author><name sortKey="Marangoni, Dv" uniqKey="Marangoni D">DV Marangoni</name></author><author><name sortKey="Smith, Sp" uniqKey="Smith S">SP Smith</name></author><author><name sortKey="Alves, Em" uniqKey="Alves E">EM Alves</name></author><author><name sortKey="Pellegrino, Fl" uniqKey="Pellegrino F">FL Pellegrino</name></author><author><name sortKey="Riley, Lw" uniqKey="Riley L">LW Riley</name></author><author><name sortKey="Moreira, Bm" uniqKey="Moreira B">BM Moreira</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Banerjee, R" uniqKey="Banerjee R">R Banerjee</name></author><author><name sortKey="Johnston, B" uniqKey="Johnston B">B Johnston</name></author><author><name sortKey="Lohse, C" uniqKey="Lohse C">C Lohse</name></author><author><name sortKey="Chattopadhyay, S" uniqKey="Chattopadhyay S">S Chattopadhyay</name></author><author><name sortKey="Tchesnokova, V" uniqKey="Tchesnokova V">V Tchesnokova</name></author><author><name sortKey="Sokurenko, Ev" uniqKey="Sokurenko E">EV Sokurenko</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Burdet, C" uniqKey="Burdet C">C Burdet</name></author><author><name sortKey="Clermont, O" uniqKey="Clermont O">O Clermont</name></author><author><name sortKey="Bonacorsi, S" uniqKey="Bonacorsi S">S Bonacorsi</name></author><author><name sortKey="Laouenan, C" uniqKey="Laouenan C">C Laouénan</name></author><author><name sortKey="Bingen, E" uniqKey="Bingen E">E Bingen</name></author><author><name sortKey="Aujard, Y" uniqKey="Aujard Y">Y Aujard</name></author><author><name sortKey="Mentre, F" uniqKey="Mentre F">F Mentré</name></author><author><name sortKey="Lefort, A" uniqKey="Lefort A">A Lefort</name></author><author><name sortKey="Denamur, E" uniqKey="Denamur E">E Denamur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alghoribi, Mf" uniqKey="Alghoribi M">MF Alghoribi</name></author><author><name sortKey="Gibreel, Tm" uniqKey="Gibreel T">TM Gibreel</name></author><author><name sortKey="Farnham, G" uniqKey="Farnham G">G Farnham</name></author><author><name sortKey="Al Johani, Sm" uniqKey="Al Johani S">SM Al Johani</name></author><author><name sortKey="Balkhy, Hh" uniqKey="Balkhy H">HH Balkhy</name></author><author><name sortKey="Upton, M" uniqKey="Upton M">M Upton</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Basmaci, R" uniqKey="Basmaci R">R Basmaci</name></author><author><name sortKey="Bonacorsi, S" uniqKey="Bonacorsi S">S Bonacorsi</name></author><author><name sortKey="Bidet, P" uniqKey="Bidet P">P Bidet</name></author><author><name sortKey="Biran, V" uniqKey="Biran V">V Biran</name></author><author><name sortKey="Aujard, Y" uniqKey="Aujard Y">Y Aujard</name></author><author><name sortKey="Bingen, E" uniqKey="Bingen E">E Bingen</name></author><author><name sortKey="Bechet, S" uniqKey="Bechet S">S Béchet</name></author><author><name sortKey="Cohen, R" uniqKey="Cohen R">R Cohen</name></author><author><name sortKey="Levy, C" uniqKey="Levy C">C Levy</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yun, Kw" uniqKey="Yun K">KW Yun</name></author><author><name sortKey="Kim, Ds" uniqKey="Kim D">DS Kim</name></author><author><name sortKey="Kim, W" uniqKey="Kim W">W Kim</name></author><author><name sortKey="Lim, Is" uniqKey="Lim I">IS Lim</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, S" uniqKey="Wang S">S Wang</name></author><author><name sortKey="Zhao, Sy" uniqKey="Zhao S">SY Zhao</name></author><author><name sortKey="Xiao, Sz" uniqKey="Xiao S">SZ Xiao</name></author><author><name sortKey="Gu, Ff" uniqKey="Gu F">FF Gu</name></author><author><name sortKey="Liu, Qz" uniqKey="Liu Q">QZ Liu</name></author><author><name sortKey="Tang, J" uniqKey="Tang J">J Tang</name></author><author><name sortKey="Guo, Xk" uniqKey="Guo X">XK Guo</name></author><author><name sortKey="Ni, Yx" uniqKey="Ni Y">YX Ni</name></author><author><name sortKey="Han, Lz" uniqKey="Han L">LZ Han</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Blyton, Md" uniqKey="Blyton M">MD Blyton</name></author><author><name sortKey="Pi, H" uniqKey="Pi H">H Pi</name></author><author><name sortKey="Vangchhia, B" uniqKey="Vangchhia B">B Vangchhia</name></author><author><name sortKey="Abraham, S" uniqKey="Abraham S">S Abraham</name></author><author><name sortKey="Trott, Dj" uniqKey="Trott D">DJ Trott</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author><author><name sortKey="Gordon, Dm" uniqKey="Gordon D">DM Gordon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gordon, Dm" uniqKey="Gordon D">DM Gordon</name></author><author><name sortKey="Cowling, A" uniqKey="Cowling A">A Cowling</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gordon, Dm" uniqKey="Gordon D">DM Gordon</name></author><author><name sortKey="Stern, Se" uniqKey="Stern S">SE Stern</name></author><author><name sortKey="Collignon, Pj" uniqKey="Collignon P">PJ Collignon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Weissman, Sj" uniqKey="Weissman S">SJ Weissman</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author><author><name sortKey="Tchesnokova, V" uniqKey="Tchesnokova V">V Tchesnokova</name></author><author><name sortKey="Billig, M" uniqKey="Billig M">M Billig</name></author><author><name sortKey="Dykhuizen, D" uniqKey="Dykhuizen D">D Dykhuizen</name></author><author><name sortKey="Riddell, K" uniqKey="Riddell K">K Riddell</name></author><author><name sortKey="Rogers, P" uniqKey="Rogers P">P Rogers</name></author><author><name sortKey="Qin, X" uniqKey="Qin X">X Qin</name></author><author><name sortKey="Butler Wu, S" uniqKey="Butler Wu S">S Butler-Wu</name></author><author><name sortKey="Cookson, Bt" uniqKey="Cookson B">BT Cookson</name></author><author><name sortKey="Fang, Fc" uniqKey="Fang F">FC Fang</name></author><author><name sortKey="Scholes, D" uniqKey="Scholes D">D Scholes</name></author><author><name sortKey="Chattopadhyay, S" uniqKey="Chattopadhyay S">S Chattopadhyay</name></author><author><name sortKey="Sokurenko, E" uniqKey="Sokurenko E">E Sokurenko</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author><author><name sortKey="Porter, S" uniqKey="Porter S">S Porter</name></author><author><name sortKey="Johnston, B" uniqKey="Johnston B">B Johnston</name></author><author><name sortKey="Kuskowski, Ma" uniqKey="Kuskowski M">MA Kuskowski</name></author><author><name sortKey="Spurbeck, Rr" uniqKey="Spurbeck R">RR Spurbeck</name></author><author><name sortKey="Mobley, Hl" uniqKey="Mobley H">HL Mobley</name></author><author><name sortKey="Williamson, Da" uniqKey="Williamson D">DA Williamson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author><author><name sortKey="Russo, Ta" uniqKey="Russo T">TA Russo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author><author><name sortKey="Clermont, O" uniqKey="Clermont O">O Clermont</name></author><author><name sortKey="Menard, M" uniqKey="Menard M">M Menard</name></author><author><name sortKey="Kuskowski, Ma" uniqKey="Kuskowski M">MA Kuskowski</name></author><author><name sortKey="Picard, B" uniqKey="Picard B">B Picard</name></author><author><name sortKey="Denamur, E" uniqKey="Denamur E">E Denamur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lefort, A" uniqKey="Lefort A">A Lefort</name></author><author><name sortKey="Panhard, X" uniqKey="Panhard X">X Panhard</name></author><author><name sortKey="Clermont, O" uniqKey="Clermont O">O Clermont</name></author><author><name sortKey="Woerther, Pl" uniqKey="Woerther P">PL Woerther</name></author><author><name sortKey="Branger, C" uniqKey="Branger C">C Branger</name></author><author><name sortKey="Mentre, F" uniqKey="Mentre F">F Mentré</name></author><author><name sortKey="Fantin, B" uniqKey="Fantin B">B Fantin</name></author><author><name sortKey="Wolff, M" uniqKey="Wolff M">M Wolff</name></author><author><name sortKey="Denamur, E" uniqKey="Denamur E">E Denamur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Skurnik, D" uniqKey="Skurnik D">D Skurnik</name></author><author><name sortKey="Clermont, O" uniqKey="Clermont O">O Clermont</name></author><author><name sortKey="Guillard, T" uniqKey="Guillard T">T Guillard</name></author><author><name sortKey="Launay, A" uniqKey="Launay A">A Launay</name></author><author><name sortKey="Danilchanka, O" uniqKey="Danilchanka O">O Danilchanka</name></author><author><name sortKey="Pons, S" uniqKey="Pons S">S Pons</name></author><author><name sortKey="Diancourt, L" uniqKey="Diancourt L">L Diancourt</name></author><author><name sortKey="Lebreton, F" uniqKey="Lebreton F">F Lebreton</name></author><author><name sortKey="Kadlec, K" uniqKey="Kadlec K">K Kadlec</name></author><author><name sortKey="Roux, D" uniqKey="Roux D">D Roux</name></author><author><name sortKey="Jiang, D" uniqKey="Jiang D">D Jiang</name></author><author><name sortKey="Dion, S" uniqKey="Dion S">S Dion</name></author><author><name sortKey="Aschard, H" uniqKey="Aschard H">H Aschard</name></author><author><name sortKey="Denamur, M" uniqKey="Denamur M">M Denamur</name></author><author><name sortKey="Cywes Bentley, C" uniqKey="Cywes Bentley C">C Cywes-Bentley</name></author><author><name sortKey="Schwarz, S" uniqKey="Schwarz S">S Schwarz</name></author><author><name sortKey="Tenaillon, O" uniqKey="Tenaillon O">O Tenaillon</name></author><author><name sortKey="Andremont, A" uniqKey="Andremont A">A Andremont</name></author><author><name sortKey="Picard, B" uniqKey="Picard B">B Picard</name></author><author><name sortKey="Mekalanos, J" uniqKey="Mekalanos J">J Mekalanos</name></author><author><name sortKey="Brisse, S" uniqKey="Brisse S">S Brisse</name></author><author><name sortKey="Denamur, E" uniqKey="Denamur E">E Denamur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Massot, M" uniqKey="Massot M">M Massot</name></author><author><name sortKey="Daubie, As" uniqKey="Daubie A">AS Daubié</name></author><author><name sortKey="Clermont, O" uniqKey="Clermont O">O Clermont</name></author><author><name sortKey="Jaureguy, F" uniqKey="Jaureguy F">F Jauréguy</name></author><author><name sortKey="Couffignal, C" uniqKey="Couffignal C">C Couffignal</name></author><author><name sortKey="Dahbi, G" uniqKey="Dahbi G">G Dahbi</name></author><author><name sortKey="Mora, A" uniqKey="Mora A">A Mora</name></author><author><name sortKey="Blanco, J" uniqKey="Blanco J">J Blanco</name></author><author><name sortKey="Branger, C" uniqKey="Branger C">C Branger</name></author><author><name sortKey="Mentre, F" uniqKey="Mentre F">F Mentré</name></author><author><name sortKey="Eddi, A" uniqKey="Eddi A">A Eddi</name></author><author><name sortKey="Picard, B" uniqKey="Picard B">B Picard</name></author><author><name sortKey="Denamur, E" uniqKey="Denamur E">E Denamur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sannes, Mr" uniqKey="Sannes M">MR Sannes</name></author><author><name sortKey="Kuskowski, Ma" uniqKey="Kuskowski M">MA Kuskowski</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Banerjee, R" uniqKey="Banerjee R">R Banerjee</name></author><author><name sortKey="Johnston, B" uniqKey="Johnston B">B Johnston</name></author><author><name sortKey="Lohse, C" uniqKey="Lohse C">C Lohse</name></author><author><name sortKey="Porter, Sb" uniqKey="Porter S">SB Porter</name></author><author><name sortKey="Clabots, C" uniqKey="Clabots C">C Clabots</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Colpan, A" uniqKey="Colpan A">A Colpan</name></author><author><name sortKey="Johnston, B" uniqKey="Johnston B">B Johnston</name></author><author><name sortKey="Porter, S" uniqKey="Porter S">S Porter</name></author><author><name sortKey="Clabots, C" uniqKey="Clabots C">C Clabots</name></author><author><name sortKey="Anway, R" uniqKey="Anway R">R Anway</name></author><author><name sortKey="Thao, L" uniqKey="Thao L">L Thao</name></author><author><name sortKey="Kuskowski, Ma" uniqKey="Kuskowski M">MA Kuskowski</name></author><author><name sortKey="Tchesnokova, V" uniqKey="Tchesnokova V">V Tchesnokova</name></author><author><name sortKey="Sokurenko, Ev" uniqKey="Sokurenko E">EV Sokurenko</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Drawz, Sm" uniqKey="Drawz S">SM Drawz</name></author><author><name sortKey="Porter, S" uniqKey="Porter S">S Porter</name></author><author><name sortKey="Kuskowski, Ma" uniqKey="Kuskowski M">MA Kuskowski</name></author><author><name sortKey="Johnston, B" uniqKey="Johnston B">B Johnston</name></author><author><name sortKey="Clabots, C" uniqKey="Clabots C">C Clabots</name></author><author><name sortKey="Kline, S" uniqKey="Kline S">S Kline</name></author><author><name sortKey="Ferrieri, P" uniqKey="Ferrieri P">P Ferrieri</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Drekonja, Dm" uniqKey="Drekonja D">DM Drekonja</name></author><author><name sortKey="Kuskowski, Ma" uniqKey="Kuskowski M">MA Kuskowski</name></author><author><name sortKey="Anway, R" uniqKey="Anway R">R Anway</name></author><author><name sortKey="Johnston, Bd" uniqKey="Johnston B">BD Johnston</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Anantham, S" uniqKey="Anantham S">S Anantham</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Touchon, M" uniqKey="Touchon M">M Touchon</name></author><author><name sortKey="Hoede, C" uniqKey="Hoede C">C Hoede</name></author><author><name sortKey="Tenaillon, O" uniqKey="Tenaillon O">O Tenaillon</name></author><author><name sortKey="Barbe, V" uniqKey="Barbe V">V Barbe</name></author><author><name sortKey="Baeriswyl, S" uniqKey="Baeriswyl S">S Baeriswyl</name></author><author><name sortKey="Bidet, P" uniqKey="Bidet P">P Bidet</name></author><author><name sortKey="Bingen, E" uniqKey="Bingen E">E Bingen</name></author><author><name sortKey="Bonacorsi, S" uniqKey="Bonacorsi S">S Bonacorsi</name></author><author><name sortKey="Bouchier, C" uniqKey="Bouchier C">C Bouchier</name></author><author><name sortKey="Bouvet, O" uniqKey="Bouvet O">O Bouvet</name></author><author><name sortKey="Calteau, A" uniqKey="Calteau A">A Calteau</name></author><author><name sortKey="Chiapello, H" uniqKey="Chiapello H">H Chiapello</name></author><author><name sortKey="Clermont, O" uniqKey="Clermont O">O Clermont</name></author><author><name sortKey="Cruveiller, S" uniqKey="Cruveiller S">S Cruveiller</name></author><author><name sortKey="Danchin, A" uniqKey="Danchin A">A Danchin</name></author><author><name sortKey="Diard, M" uniqKey="Diard M">M Diard</name></author><author><name sortKey="Dossat, C" uniqKey="Dossat C">C Dossat</name></author><author><name sortKey="Karoui, Me" uniqKey="Karoui M">ME Karoui</name></author><author><name sortKey="Frapy, E" uniqKey="Frapy E">E Frapy</name></author><author><name sortKey="Garry, L" uniqKey="Garry L">L Garry</name></author><author><name sortKey="Ghigo, Jm" uniqKey="Ghigo J">JM Ghigo</name></author><author><name sortKey="Gilles, Am" uniqKey="Gilles A">AM Gilles</name></author><author><name sortKey="Johnson, J" uniqKey="Johnson J">J Johnson</name></author><author><name sortKey="Le Bouguenec, C" uniqKey="Le Bouguenec C">C Le Bouguénec</name></author><author><name sortKey="Lescat, M" uniqKey="Lescat M">M Lescat</name></author><author><name sortKey="Mangenot, S" uniqKey="Mangenot S">S Mangenot</name></author><author><name sortKey="Martinez Jehanne, V" uniqKey="Martinez Jehanne V">V Martinez-Jéhanne</name></author><author><name sortKey="Matic, I" uniqKey="Matic I">I Matic</name></author><author><name sortKey="Nassif, X" uniqKey="Nassif X">X Nassif</name></author><author><name sortKey="Oztas, S" uniqKey="Oztas S">S Oztas</name></author><author><name sortKey="Petit, Ma" uniqKey="Petit M">MA Petit</name></author><author><name sortKey="Pichon, C" uniqKey="Pichon C">C Pichon</name></author><author><name sortKey="Rouy, Z" uniqKey="Rouy Z">Z Rouy</name></author><author><name sortKey="Ruf, Cs" uniqKey="Ruf C">CS Ruf</name></author><author><name sortKey="Schneider, D" uniqKey="Schneider D">D Schneider</name></author><author><name sortKey="Tourret, J" uniqKey="Tourret J">J Tourret</name></author><author><name sortKey="Vacherie, B" uniqKey="Vacherie B">B Vacherie</name></author><author><name sortKey="Vallenet, D" uniqKey="Vallenet D">D Vallenet</name></author><author><name sortKey="Medigue, C" uniqKey="Medigue C">C Médigue</name></author><author><name sortKey="Rocha, Ep" uniqKey="Rocha E">EP Rocha</name></author><author><name sortKey="Denamur, E" uniqKey="Denamur E">E Denamur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Achtman, M" uniqKey="Achtman M">M Achtman</name></author><author><name sortKey="Mercer, A" uniqKey="Mercer A">A Mercer</name></author><author><name sortKey="Kusecek, B" uniqKey="Kusecek B">B Kusecek</name></author><author><name sortKey="Pohl, A" uniqKey="Pohl A">A Pohl</name></author><author><name sortKey="Heuzenroeder, M" uniqKey="Heuzenroeder M">M Heuzenroeder</name></author><author><name sortKey="Aaronson, W" uniqKey="Aaronson W">W Aaronson</name></author><author><name sortKey="Sutton, A" uniqKey="Sutton A">A Sutton</name></author><author><name sortKey="Silver, Rp" uniqKey="Silver R">RP Silver</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bidet, P" uniqKey="Bidet P">P Bidet</name></author><author><name sortKey="Mahjoub Messai, F" uniqKey="Mahjoub Messai F">F Mahjoub-Messai</name></author><author><name sortKey="Blanco, J" uniqKey="Blanco J">J Blanco</name></author><author><name sortKey="Blanco, J" uniqKey="Blanco J">J Blanco</name></author><author><name sortKey="Dehem, M" uniqKey="Dehem M">M Dehem</name></author><author><name sortKey="Aujard, Y" uniqKey="Aujard Y">Y Aujard</name></author><author><name sortKey="Bingen, E" uniqKey="Bingen E">E Bingen</name></author><author><name sortKey="Bonacorsi, S" uniqKey="Bonacorsi S">S Bonacorsi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Day, Mj" uniqKey="Day M">MJ Day</name></author><author><name sortKey="Doumith, M" uniqKey="Doumith M">M Doumith</name></author><author><name sortKey="Abernethy, J" uniqKey="Abernethy J">J Abernethy</name></author><author><name sortKey="Hope, R" uniqKey="Hope R">R Hope</name></author><author><name sortKey="Reynolds, R" uniqKey="Reynolds R">R Reynolds</name></author><author><name sortKey="Wain, J" uniqKey="Wain J">J Wain</name></author><author><name sortKey="Livermore, Dm" uniqKey="Livermore D">DM Livermore</name></author><author><name sortKey="Woodford, N" uniqKey="Woodford N">N Woodford</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Banerjee, R" uniqKey="Banerjee R">R Banerjee</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhou, Z" uniqKey="Zhou Z">Z Zhou</name></author><author><name sortKey="Mccann, A" uniqKey="Mccann A">A McCann</name></author><author><name sortKey="Litrup, E" uniqKey="Litrup E">E Litrup</name></author><author><name sortKey="Murphy, R" uniqKey="Murphy R">R Murphy</name></author><author><name sortKey="Cormican, M" uniqKey="Cormican M">M Cormican</name></author><author><name sortKey="Fanning, S" uniqKey="Fanning S">S Fanning</name></author><author><name sortKey="Brown, D" uniqKey="Brown D">D Brown</name></author><author><name sortKey="Guttman, Ds" uniqKey="Guttman D">DS Guttman</name></author><author><name sortKey="Brisse, S" uniqKey="Brisse S">S Brisse</name></author><author><name sortKey="Achtman, M" uniqKey="Achtman M">M Achtman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kaas, Rs" uniqKey="Kaas R">RS Kaas</name></author><author><name sortKey="Friis, C" uniqKey="Friis C">C Friis</name></author><author><name sortKey="Ussery, Dw" uniqKey="Ussery D">DW Ussery</name></author><author><name sortKey="Aarestrup, Fm" uniqKey="Aarestrup F">FM Aarestrup</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Seemann, T" uniqKey="Seemann T">T Seemann</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Page, Aj" uniqKey="Page A">AJ Page</name></author><author><name sortKey="Cummins, Ca" uniqKey="Cummins C">CA Cummins</name></author><author><name sortKey="Hunt, M" uniqKey="Hunt M">M Hunt</name></author><author><name sortKey="Wong, Vk" uniqKey="Wong V">VK Wong</name></author><author><name sortKey="Reuter, S" uniqKey="Reuter S">S Reuter</name></author><author><name sortKey="Holden, Mt" uniqKey="Holden M">MT Holden</name></author><author><name sortKey="Fookes, M" uniqKey="Fookes M">M Fookes</name></author><author><name sortKey="Falush, D" uniqKey="Falush D">D Falush</name></author><author><name sortKey="Keane, Ja" uniqKey="Keane J">JA Keane</name></author><author><name sortKey="Parkhill, J" uniqKey="Parkhill J">J Parkhill</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Treangen, Tj" uniqKey="Treangen T">TJ Treangen</name></author><author><name sortKey="Ondov, Bd" uniqKey="Ondov B">BD Ondov</name></author><author><name sortKey="Koren, S" uniqKey="Koren S">S Koren</name></author><author><name sortKey="Phillippy, Am" uniqKey="Phillippy A">AM Phillippy</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zankari, E" uniqKey="Zankari E">E Zankari</name></author><author><name sortKey="Hasman, H" uniqKey="Hasman H">H Hasman</name></author><author><name sortKey="Cosentino, S" uniqKey="Cosentino S">S Cosentino</name></author><author><name sortKey="Vestergaard, M" uniqKey="Vestergaard M">M Vestergaard</name></author><author><name sortKey="Rasmussen, S" uniqKey="Rasmussen S">S Rasmussen</name></author><author><name sortKey="Lund, O" uniqKey="Lund O">O Lund</name></author><author><name sortKey="Aarestrup, Fm" uniqKey="Aarestrup F">FM Aarestrup</name></author><author><name sortKey="Larsen, Mv" uniqKey="Larsen M">MV Larsen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Joensen, Kg" uniqKey="Joensen K">KG Joensen</name></author><author><name sortKey="Tetzschner, Am" uniqKey="Tetzschner A">AM Tetzschner</name></author><author><name sortKey="Iguchi, A" uniqKey="Iguchi A">A Iguchi</name></author><author><name sortKey="Aarestrup, Fm" uniqKey="Aarestrup F">FM Aarestrup</name></author><author><name sortKey="Scheutz, F" uniqKey="Scheutz F">F Scheutz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jia, B" uniqKey="Jia B">B Jia</name></author><author><name sortKey="Raphenya, Ar" uniqKey="Raphenya A">AR Raphenya</name></author><author><name sortKey="Alcock, B" uniqKey="Alcock B">B Alcock</name></author><author><name sortKey="Waglechner, N" uniqKey="Waglechner N">N Waglechner</name></author><author><name sortKey="Guo, P" uniqKey="Guo P">P Guo</name></author><author><name sortKey="Tsang, Kk" uniqKey="Tsang K">KK Tsang</name></author><author><name sortKey="Lago, Ba" uniqKey="Lago B">BA Lago</name></author><author><name sortKey="Dave, Bm" uniqKey="Dave B">BM Dave</name></author><author><name sortKey="Pereira, S" uniqKey="Pereira S">S Pereira</name></author><author><name sortKey="Sharma, An" uniqKey="Sharma A">AN Sharma</name></author><author><name sortKey="Doshi, S" uniqKey="Doshi S">S Doshi</name></author><author><name sortKey="Courtot, M" uniqKey="Courtot M">M Courtot</name></author><author><name sortKey="Lo, R" uniqKey="Lo R">R Lo</name></author><author><name sortKey="Williams, Le" uniqKey="Williams L">LE Williams</name></author><author><name sortKey="Frye, Jg" uniqKey="Frye J">JG Frye</name></author><author><name sortKey="Elsayegh, T" uniqKey="Elsayegh T">T Elsayegh</name></author><author><name sortKey="Sardar, D" uniqKey="Sardar D">D Sardar</name></author><author><name sortKey="Westman, El" uniqKey="Westman E">EL Westman</name></author><author><name sortKey="Pawlowski, Ac" uniqKey="Pawlowski A">AC Pawlowski</name></author><author><name sortKey="Johnson, Ta" uniqKey="Johnson T">TA Johnson</name></author><author><name sortKey="Brinkman, Fs" uniqKey="Brinkman F">FS Brinkman</name></author><author><name sortKey="Wright, Gd" uniqKey="Wright G">GD Wright</name></author><author><name sortKey="Mcarthur, Ag" uniqKey="Mcarthur A">AG McArthur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Brynildsrud, O" uniqKey="Brynildsrud O">O Brynildsrud</name></author><author><name sortKey="Bohlin, J" uniqKey="Bohlin J">J Bohlin</name></author><author><name sortKey="Scheffer, L" uniqKey="Scheffer L">L Scheffer</name></author><author><name sortKey="Eldholm, V" uniqKey="Eldholm V">V Eldholm</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bidet, P" uniqKey="Bidet P">P Bidet</name></author><author><name sortKey="Metais, A" uniqKey="Metais A">A Metais</name></author><author><name sortKey="Mahjoub Messai, F" uniqKey="Mahjoub Messai F">F Mahjoub-Messai</name></author><author><name sortKey="Durand, L" uniqKey="Durand L">L Durand</name></author><author><name sortKey="Dehem, M" uniqKey="Dehem M">M Dehem</name></author><author><name sortKey="Aujard, Y" uniqKey="Aujard Y">Y Aujard</name></author><author><name sortKey="Bingen, E" uniqKey="Bingen E">E Bingen</name></author><author><name sortKey="Nassif, X" uniqKey="Nassif X">X Nassif</name></author><author><name sortKey="Bonacorsi, S" uniqKey="Bonacorsi S">S Bonacorsi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Doumith, M" uniqKey="Doumith M">M Doumith</name></author><author><name sortKey="Day, M" uniqKey="Day M">M Day</name></author><author><name sortKey="Ciesielczuk, H" uniqKey="Ciesielczuk H">H Ciesielczuk</name></author><author><name sortKey="Hope, R" uniqKey="Hope R">R Hope</name></author><author><name sortKey="Underwood, A" uniqKey="Underwood A">A Underwood</name></author><author><name sortKey="Reynolds, R" uniqKey="Reynolds R">R Reynolds</name></author><author><name sortKey="Wain, J" uniqKey="Wain J">J Wain</name></author><author><name sortKey="Livermore, Dm" uniqKey="Livermore D">DM Livermore</name></author><author><name sortKey="Woodford, N" uniqKey="Woodford N">N Woodford</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Clermont, O" uniqKey="Clermont O">O Clermont</name></author><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author><author><name sortKey="Menard, M" uniqKey="Menard M">M Menard</name></author><author><name sortKey="Denamur, E" uniqKey="Denamur E">E Denamur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Johnson, Jr" uniqKey="Johnson J">JR Johnson</name></author><author><name sortKey="Stell, Al" uniqKey="Stell A">AL Stell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pritchard, L" uniqKey="Pritchard L">L Pritchard</name></author><author><name sortKey="Holden, Nj" uniqKey="Holden N">NJ Holden</name></author><author><name sortKey="Bielaszewska, M" uniqKey="Bielaszewska M">M Bielaszewska</name></author><author><name sortKey="Karch, H" uniqKey="Karch H">H Karch</name></author><author><name sortKey="Toth, Ik" uniqKey="Toth I">IK Toth</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Croucher, Nj" uniqKey="Croucher N">NJ Croucher</name></author><author><name sortKey="Page, Aj" uniqKey="Page A">AJ Page</name></author><author><name sortKey="Connor, Tr" uniqKey="Connor T">TR Connor</name></author><author><name sortKey="Delaney, Aj" uniqKey="Delaney A">AJ Delaney</name></author><author><name sortKey="Keane, Ja" uniqKey="Keane J">JA Keane</name></author><author><name sortKey="Bentley, Sd" uniqKey="Bentley S">SD Bentley</name></author><author><name sortKey="Parkhill, J" uniqKey="Parkhill J">J Parkhill</name></author><author><name sortKey="Harris, Sr" uniqKey="Harris S">SR Harris</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tamura, K" uniqKey="Tamura K">K Tamura</name></author><author><name sortKey="Stecher, G" uniqKey="Stecher G">G Stecher</name></author><author><name sortKey="Peterson, D" uniqKey="Peterson D">D Peterson</name></author><author><name sortKey="Filipski, A" uniqKey="Filipski A">A Filipski</name></author><author><name sortKey="Kumar, S" uniqKey="Kumar S">S Kumar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Deshpande, Np" uniqKey="Deshpande N">NP Deshpande</name></author><author><name sortKey="Wilkins, Mr" uniqKey="Wilkins M">MR Wilkins</name></author><author><name sortKey="Mitchell, Hm" uniqKey="Mitchell H">HM Mitchell</name></author><author><name sortKey="Kaakoush, No" uniqKey="Kaakoush N">NO Kaakoush</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Australie</li><li>France</li><li>Sri Lanka</li><li>États-Unis</li></country><region><li>Minnesota</li><li>Île-de-France</li></region><settlement><li>Créteil</li><li>Paris</li></settlement></list><tree><country name="Australie"><noRegion><name sortKey="Gordon, David M" sort="Gordon, David M" uniqKey="Gordon D" first="David M." last="Gordon">David M. Gordon</name></noRegion><name sortKey="Abayasekara, Charmalie" sort="Abayasekara, Charmalie" uniqKey="Abayasekara C" first="Charmalie" last="Abayasekara">Charmalie Abayasekara</name><name sortKey="Collignon, Peter" sort="Collignon, Peter" uniqKey="Collignon P" first="Peter" last="Collignon">Peter Collignon</name><name sortKey="Collignon, Peter" sort="Collignon, Peter" uniqKey="Collignon P" first="Peter" last="Collignon">Peter Collignon</name><name sortKey="Collignon, Peter" sort="Collignon, Peter" uniqKey="Collignon P" first="Peter" last="Collignon">Peter Collignon</name><name sortKey="Geyik, Sarah" sort="Geyik, Sarah" uniqKey="Geyik S" first="Sarah" last="Geyik">Sarah Geyik</name><name sortKey="Huang, Shiwei" sort="Huang, Shiwei" uniqKey="Huang S" first="Shiwei" last="Huang">Shiwei Huang</name><name sortKey="Kennedy, Karina" sort="Kennedy, Karina" uniqKey="Kennedy K" first="Karina" last="Kennedy">Karina Kennedy</name><name sortKey="Kennedy, Karina" sort="Kennedy, Karina" uniqKey="Kennedy K" first="Karina" last="Kennedy">Karina Kennedy</name><name sortKey="O Rien, Claire L" sort="O Rien, Claire L" uniqKey="O Rien C" first="Claire L." last="O Rien">Claire L. O Rien</name><name sortKey="O Rien, Claire L" sort="O Rien, Claire L" uniqKey="O Rien C" first="Claire L." last="O Rien">Claire L. O Rien</name><name sortKey="Pavli, Paul" sort="Pavli, Paul" uniqKey="Pavli P" first="Paul" last="Pavli">Paul Pavli</name><name sortKey="Pavli, Paul" sort="Pavli, Paul" uniqKey="Pavli P" first="Paul" last="Pavli">Paul Pavli</name><name sortKey="Rajesh, Ashwin" sort="Rajesh, Ashwin" uniqKey="Rajesh A" first="Ashwin" last="Rajesh">Ashwin Rajesh</name></country><country name="France"><region name="Île-de-France"><name sortKey="Clermont, Olivier" sort="Clermont, Olivier" uniqKey="Clermont O" first="Olivier" last="Clermont">Olivier Clermont</name></region><name sortKey="Decousser, Jean Winoc" sort="Decousser, Jean Winoc" uniqKey="Decousser J" first="Jean-Winoc" last="Decousser">Jean-Winoc Decousser</name><name sortKey="Denamur, Erick" sort="Denamur, Erick" uniqKey="Denamur E" first="Erick" last="Denamur">Erick Denamur</name><name sortKey="Denamur, Erick" sort="Denamur, Erick" uniqKey="Denamur E" first="Erick" last="Denamur">Erick Denamur</name><name sortKey="Rodriguez, Christophe" sort="Rodriguez, Christophe" uniqKey="Rodriguez C" first="Christophe" last="Rodriguez">Christophe Rodriguez</name></country><country name="Sri Lanka"><noRegion><name sortKey="Abayasekara, Charmalie" sort="Abayasekara, Charmalie" uniqKey="Abayasekara C" first="Charmalie" last="Abayasekara">Charmalie Abayasekara</name></noRegion></country><country name="États-Unis"><region name="Minnesota"><name sortKey="Johnston, Brian D" sort="Johnston, Brian D" uniqKey="Johnston B" first="Brian D." last="Johnston">Brian D. Johnston</name></region><name sortKey="Johnson, James R" sort="Johnson, James R" uniqKey="Johnson J" first="James R." last="Johnson">James R. Johnson</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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